Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 AL442647.2-201ENST00000429864 857 ntBASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 RPL13AP25-201ENST00000484130 612 ntBASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 TERF1P3-201ENST00000505638 1227 ntBASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC123567.1-201ENST00000548294 1261 ntBASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC107373.2-201ENST00000607735 490 ntBASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-4A0A0C4DH59 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 MST1L-201ENST00000442552 2185 ntBASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 VDAC1P7-201ENST00000462417 847 ntBASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC092552.1-201ENST00000547243 906 ntBASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC190387.1-201ENST00000551683 408 ntBASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 TMEM261P1-201ENST00000604899 340 ntBASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-4A0A0C4DH59 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms