Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 SPDYE19P-201ENST00000338590 713 ntBASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 NFIC-211ENST00000641145 8399 ntBASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAI2Q9Y5P3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 HYMAI-201ENST00000635591 3347 ntBASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 AC020658.6-201ENST00000623564 1870 ntBASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 MIR1909-201ENST00000411312 80 ntBASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 AL132655.2-201ENST00000596276 594 ntBASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 AC138969.3-201ENST00000546612 1459 ntBASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 AC138932.2-201ENST00000548268 1459 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms