Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 AC211429.1-201ENST00000415277 523 ntBASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 AL645939.2-201ENST00000427340 991 ntBASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 KRT18P27-201ENST00000427733 1299 ntBASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 AC008667.4-201ENST00000607370 168 ntBASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 IER3-202ENST00000376377 1350 ntBASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AL589702.1-201ENST00000641229 1509 ntBASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 GPX1P2-201ENST00000429271 606 ntBASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AC010327.5-201ENST00000586923 3061 ntBASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AC006504.5-208ENST00000588784 2401 ntBASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
RCL1Q9Y2P8 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms