Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H4Q9UPT8 AC090340.1-201ENST00000620778 4980 ntBASIC18.77■□□□□ 0.59
ZC3H4Q9UPT8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
ZC3H4Q9UPT8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.77■□□□□ 0.59
ZC3H4Q9UPT8 AC106886.4-201ENST00000623557 2502 ntBASIC18.77■□□□□ 0.59
ZC3H4Q9UPT8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZC3H4Q9UPT8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 RPL13AP19-201ENST00000434320 584 ntBASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 AC135983.4-201ENST00000564116 1262 ntBASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 AC025181.2-201ENST00000606994 802 ntBASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.76■□□□□ 0.59
ZC3H4Q9UPT8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZC3H4Q9UPT8 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 MARK2P5-201ENST00000507649 634 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 BNIP3P13-201ENST00000599968 566 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 AP001002.3-201ENST00000623482 206 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 AC079416.2-201ENST00000625035 1193 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 PRSS30P-206ENST00000641773 873 ntBASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.74■□□□□ 0.59
ZC3H4Q9UPT8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms