Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 SDHAP3-202ENST00000515467 728 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC025048.3-201ENST00000590609 569 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC097359.3-201ENST00000603982 1210 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC005702.4-201ENST00000618393 416 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 BTBD7P1-201ENST00000447253 1453 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AL161772.1-201ENST00000610494 4412 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC022532.1-201ENST00000624563 1728 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC022144.1-201ENST00000602255 1580 ntBASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AC013268.4-201ENST00000637413 2228 ntBASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AC009407.1-201ENST00000568958 598 ntBASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 INGX-202ENST00000489074 768 ntBASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms