Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 LINC01101-201ENST00000622953 1884 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 KRT8P48-201ENST00000515599 1220 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AC105233.2-201ENST00000523697 349 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AF228730.5-201ENST00000530288 346 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AC243562.1-201ENST00000560672 389 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SNHG9-202ENST00000564014 471 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AC024267.1-201ENST00000582320 895 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AC022145.2-201ENST00000598203 171 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AC004835.2-201ENST00000603762 682 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 AL691403.2-201ENST00000618460 490 ntBASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AC112693.3-201ENST00000624819 1983 ntBASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms