Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 SERBP1P5-201ENST00000510079 1181 ntBASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 SPCS2P1-201ENST00000561636 679 ntBASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 RARRES2P5-201ENST00000564013 466 ntBASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 AJ011932.1-201ENST00000621707 465 ntBASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 AL355385.1-201ENST00000606123 409 ntBASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 AL596257.1-201ENST00000641463 2694 ntBASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BLOC1S4Q9NUP1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 GAPDHP40-201ENST00000505218 1006 ntBASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 TPRX2P-201ENST00000535362 881 ntBASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 AL096865.1-201ENST00000606796 927 ntBASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 TNRC18P2-201ENST00000417666 2714 ntBASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BLOC1S4Q9NUP1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BLOC1S4Q9NUP1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BLOC1S4Q9NUP1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.33■□□□□ 0.37
BLOC1S4Q9NUP1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
BLOC1S4Q9NUP1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms