Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC138761.1-201ENST00000584393 385 ntBASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.99□□□□□ -0.01
CCM2LQ9NUG4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 AC140479.7-201ENST00000636301 2332 ntBASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 AP000344.2-201ENST00000512987 629 ntBASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 IGHV3-65-201ENST00000523210 341 ntBASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 AC008667.4-201ENST00000607370 168 ntBASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.98□□□□□ -0.01
CCM2LQ9NUG4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 HMGA1P7-201ENST00000406908 502 ntBASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 FAM58CP-201ENST00000435741 640 ntBASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 PDPK2P-202ENST00000562415 1191 ntBASIC14.97□□□□□ -0.01
CCM2LQ9NUG4 MIR4313-201ENST00000580760 101 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms