Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FAM86MP-201ENST00000340703 885 ntBASIC16.23■□□□□ 0.19
HPS4Q9NQG7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 BCRP2-202ENST00000447763 634 ntBASIC16.23■□□□□ 0.19
HPS4Q9NQG7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 BCRP6-201ENST00000510112 632 ntBASIC16.23■□□□□ 0.19
HPS4Q9NQG7 BCRP7-201ENST00000511549 544 ntBASIC16.23■□□□□ 0.19
HPS4Q9NQG7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 AL049840.4-201ENST00000602422 811 ntBASIC16.23■□□□□ 0.19
HPS4Q9NQG7 AL022328.1-201ENST00000610050 478 ntBASIC16.23■□□□□ 0.19
HPS4Q9NQG7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 AC022188.1-201ENST00000620960 1664 ntBASIC16.23■□□□□ 0.19
HPS4Q9NQG7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS4Q9NQG7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 KLF2P4-201ENST00000451959 1225 ntBASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 VDAC1P7-201ENST00000462417 847 ntBASIC16.22■□□□□ 0.19
HPS4Q9NQG7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AP001889.1-201ENST00000525414 633 ntBASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AC068587.3-201ENST00000526613 355 ntBASIC16.22■□□□□ 0.19
HPS4Q9NQG7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 ENPP7P5-201ENST00000541031 1031 ntBASIC16.22■□□□□ 0.19
HPS4Q9NQG7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 AC120045.2-201ENST00000567334 178 ntBASIC16.22■□□□□ 0.19
HPS4Q9NQG7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS4Q9NQG7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AL607033.1-201ENST00000623900 1599 ntBASIC16.21■□□□□ 0.19
HPS4Q9NQG7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms