Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC148477.4-201ENST00000613430 1793 ntBASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 MIR4538-201ENST00000581377 78 ntBASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC022532.1-201ENST00000624563 1728 ntBASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AP001582.1-201ENST00000525856 295 ntBASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.82□□□□□ -0.2
KIAA1549Q9HCM3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 MST1L-201ENST00000442552 2185 ntBASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ACTG1P3-201ENST00000431775 1114 ntBASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 AC023024.2-201ENST00000623561 1993 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms