Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MIR1233-1-201ENST00000408722 82 ntBASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 DNAJB3-201ENST00000446806 729 ntBASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 AC092865.5-201ENST00000545435 363 ntBASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRTM1Q9HBL6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 FO393414.2-201ENST00000405153 598 ntBASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AC004461.1-201ENST00000412461 403 ntBASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AL627223.1-201ENST00000416693 442 ntBASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AC003101.2-201ENST00000612557 442 ntBASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRTM1Q9HBL6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms