Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC126365.1-201ENST00000578585 1514 ntBASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 AL139400.1-201ENST00000366220 510 ntBASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 RPL37AP1-201ENST00000412502 279 ntBASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 AC025678.2-201ENST00000562061 970 ntBASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 AC023511.2-201ENST00000618803 211 ntBASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 KRT8P44-201ENST00000441609 1350 ntBASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 TUBB3P1-201ENST00000405796 1332 ntBASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 SPDYE12P-201ENST00000618416 771 ntBASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 Z97205.2-201ENST00000564697 1639 ntBASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC40Q9H9A6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms