Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RPS24P6-201ENST00000452670 400 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RPS3AP49-201ENST00000472161 790 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC079203.1-201ENST00000487972 404 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 SLC16A14P1-201ENST00000506846 1117 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AP005901.1-201ENST00000508721 1181 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RNU6-1046P-201ENST00000516538 107 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC106038.2-201ENST00000520706 568 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 ST6GALNAC1-207ENST00000589992 419 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC013244.1-201ENST00000604279 193 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AL136162.1-201ENST00000607711 1078 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 MPST-208ENST00000628507 698 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 OR8A1-204ENST00000642111 1145 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC142086.1-201ENST00000566260 1682 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 SMG8-203ENST00000578922 2178 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AC104118.1-201ENST00000607625 1589 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 TSPY26P-201ENST00000476365 1326 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 TAF1A-203ENST00000366890 1648 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC017002.4-201ENST00000604721 1525 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 PAGE1-201ENST00000376150 665 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AL079341.1-201ENST00000404701 1207 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 OR4K12P-201ENST00000406538 961 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 RN7SKP166-201ENST00000410812 305 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AL117350.1-201ENST00000418348 640 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 PAICSP7-201ENST00000419829 962 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 ZYG11AP1-201ENST00000430329 837 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 FGF7P3-201ENST00000454645 303 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 RPL7AP52-201ENST00000458096 790 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 RPL5P24-201ENST00000463742 885 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 RPL7P1-201ENST00000468161 747 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 RPL7P9-201ENST00000468715 747 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC093700.1-201ENST00000503348 717 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC00499-202ENST00000507145 540 ntTSL 4 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 HMGN1P17-201ENST00000513734 295 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 TRMT10BP1-201ENST00000519377 943 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 DBI-210ENST00000542275 757 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AL161670.1-201ENST00000554348 137 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms