Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZBED1P1-201ENST00000502364 1930 ntBASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AL365209.1-201ENST00000624418 6473 ntBASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 KRT8P48-201ENST00000515599 1220 ntBASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC106730.1-201ENST00000566722 1090 ntBASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 BX640515.1-201ENST00000617215 977 ntBASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AL009178.2-201ENST00000597278 2719 ntBASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SHANK2-AS3Q9BTD1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AP3S2-216ENST00000617003 1561 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AL607033.1-201ENST00000623900 1599 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AZGP1P1-201ENST00000411909 902 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms