Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 AC018735.1-201ENST00000437208 1502 ntBASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 AC091804.1-201ENST00000486888 567 ntBASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP2Q96SN8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 AC020658.6-201ENST00000623564 1870 ntBASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 AL136309.1-201ENST00000403917 691 ntBASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 RNA5SP486-201ENST00000515961 83 ntBASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP2Q96SN8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 AC138466.3-201ENST00000619983 221 ntBASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 AL139099.5-201ENST00000635274 300 ntBASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP2Q96SN8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms