Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.83□□□□□ -0.04
NR1H4Q96RI1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 AC015909.5-201ENST00000624336 2266 ntBASIC14.83□□□□□ -0.04
NR1H4Q96RI1 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.82□□□□□ -0.04
NR1H4Q96RI1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 DUX4L26-201ENST00000489078 1255 ntBASIC14.82□□□□□ -0.04
NR1H4Q96RI1 AC011840.4-201ENST00000578471 627 ntBASIC14.82□□□□□ -0.04
NR1H4Q96RI1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 WASH3P-207ENST00000560956 1394 ntBASIC14.82□□□□□ -0.04
NR1H4Q96RI1 FO538757.1-201ENST00000623083 1397 ntBASIC14.82□□□□□ -0.04
NR1H4Q96RI1 AC005562.1-201ENST00000583030 3219 ntBASIC14.82□□□□□ -0.04
NR1H4Q96RI1 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H4Q96RI1 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 NUTM2HP-201ENST00000442076 2498 ntBASIC14.81□□□□□ -0.04
NR1H4Q96RI1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 AC245100.5-201ENST00000452108 331 ntBASIC14.81□□□□□ -0.04
NR1H4Q96RI1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.81□□□□□ -0.04
NR1H4Q96RI1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms