Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 AC079316.1-201ENST00000548397 411 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.66■□□□□ 0.42
FGD4Q96M96 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 AL138799.1-201ENST00000448213 1675 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
FGD4Q96M96 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 PCDH8P1-201ENST00000428983 2773 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.66■□□□□ 0.42
FGD4Q96M96 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FGD4Q96M96 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 AC006001.1-201ENST00000325130 474 ntBASIC17.65■□□□□ 0.42
FGD4Q96M96 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.65■□□□□ 0.42
FGD4Q96M96 AC099548.2-209ENST00000480264 625 ntBASIC17.65■□□□□ 0.42
FGD4Q96M96 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.65■□□□□ 0.42
FGD4Q96M96 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.65■□□□□ 0.42
FGD4Q96M96 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.65■□□□□ 0.42
FGD4Q96M96 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.65■□□□□ 0.42
FGD4Q96M96 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.65■□□□□ 0.42
FGD4Q96M96 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.65■□□□□ 0.42
FGD4Q96M96 AC010328.2-201ENST00000597698 1111 ntBASIC17.65■□□□□ 0.42
FGD4Q96M96 AC244093.1-201ENST00000610837 814 ntBASIC17.65■□□□□ 0.42
FGD4Q96M96 AP005019.2-201ENST00000615104 511 ntBASIC17.65■□□□□ 0.42
FGD4Q96M96 AC145423.3-201ENST00000615987 467 ntBASIC17.65■□□□□ 0.42
FGD4Q96M96 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FGD4Q96M96 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.65■□□□□ 0.42
FGD4Q96M96 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
FGD4Q96M96 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.64■□□□□ 0.42
FGD4Q96M96 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.64■□□□□ 0.42
FGD4Q96M96 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
FGD4Q96M96 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.64■□□□□ 0.42
FGD4Q96M96 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
FGD4Q96M96 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
FGD4Q96M96 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.64■□□□□ 0.41
FGD4Q96M96 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
FGD4Q96M96 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
FGD4Q96M96 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.64■□□□□ 0.41
FGD4Q96M96 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.64■□□□□ 0.41
FGD4Q96M96 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.64■□□□□ 0.41
FGD4Q96M96 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.64■□□□□ 0.41
FGD4Q96M96 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.64■□□□□ 0.41
FGD4Q96M96 C2orf69P2-201ENST00000562032 1123 ntBASIC17.64■□□□□ 0.41
FGD4Q96M96 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.64■□□□□ 0.41
FGD4Q96M96 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.64■□□□□ 0.41
FGD4Q96M96 RN7SL560P-201ENST00000577943 264 ntBASIC17.64■□□□□ 0.41
FGD4Q96M96 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.64■□□□□ 0.41
FGD4Q96M96 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FGD4Q96M96 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.64■□□□□ 0.41
FGD4Q96M96 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms