Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 MARK2P5-201ENST00000507649 634 ntBASIC15.42■□□□□ 0.06
CLDN23Q96B33 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 AL353770.1-201ENST00000614915 403 ntBASIC15.42■□□□□ 0.06
CLDN23Q96B33 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.41■□□□□ 0.06
CLDN23Q96B33 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 AC104073.2-201ENST00000453737 312 ntBASIC15.41■□□□□ 0.06
CLDN23Q96B33 RNMTL1P1-201ENST00000454103 560 ntBASIC15.41■□□□□ 0.06
CLDN23Q96B33 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 RN7SL555P-201ENST00000584742 339 ntBASIC15.41■□□□□ 0.06
CLDN23Q96B33 AC005324.6-201ENST00000587972 613 ntBASIC15.41■□□□□ 0.06
CLDN23Q96B33 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN23Q96B33 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN23Q96B33 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN23Q96B33 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN23Q96B33 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN23Q96B33 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN23Q96B33 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN23Q96B33 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN23Q96B33 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN23Q96B33 MIR4750-201ENST00000584564 56 ntBASIC15.4■□□□□ 0.06
CLDN23Q96B33 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms