Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 TOMM22P5-201ENST00000416399 439 ntBASIC16.66■□□□□ 0.26
DDX1Q92499 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.66■□□□□ 0.26
DDX1Q92499 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 AC044860.1-202ENST00000559481 777 ntBASIC16.66■□□□□ 0.26
DDX1Q92499 AC015910.1-201ENST00000579400 975 ntBASIC16.66■□□□□ 0.26
DDX1Q92499 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.66■□□□□ 0.26
DDX1Q92499 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.65■□□□□ 0.26
DDX1Q92499 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.65■□□□□ 0.26
DDX1Q92499 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.65■□□□□ 0.26
DDX1Q92499 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.65■□□□□ 0.26
DDX1Q92499 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.65■□□□□ 0.26
DDX1Q92499 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.65■□□□□ 0.26
DDX1Q92499 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.65■□□□□ 0.26
DDX1Q92499 AC009477.1-201ENST00000452936 217 ntBASIC16.65■□□□□ 0.26
DDX1Q92499 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 SDHAP3-202ENST00000515467 728 ntBASIC16.65■□□□□ 0.26
DDX1Q92499 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 MIR6805-201ENST00000615055 62 ntBASIC16.65■□□□□ 0.26
DDX1Q92499 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.65■□□□□ 0.26
DDX1Q92499 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 TCAF2P1-201ENST00000291129 2421 ntBASIC16.65■□□□□ 0.26
DDX1Q92499 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.65■□□□□ 0.26
DDX1Q92499 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DDX1Q92499 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
DDX1Q92499 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DDX1Q92499 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
DDX1Q92499 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.64■□□□□ 0.26
DDX1Q92499 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DDX1Q92499 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 AC148477.4-201ENST00000613430 1793 ntBASIC16.64■□□□□ 0.25
DDX1Q92499 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.64■□□□□ 0.25
DDX1Q92499 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.64■□□□□ 0.25
DDX1Q92499 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.64■□□□□ 0.25
DDX1Q92499 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.64■□□□□ 0.25
DDX1Q92499 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.64■□□□□ 0.25
DDX1Q92499 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.64■□□□□ 0.25
DDX1Q92499 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.64■□□□□ 0.25
DDX1Q92499 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms