Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX2-3Q8TAU0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 FAM86LP-201ENST00000478302 853 ntBASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 AL139099.5-201ENST00000635274 300 ntBASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 AC018665.1-201ENST00000622927 1362 ntBASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX2-3Q8TAU0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 MST1L-201ENST00000442552 2185 ntBASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 GOLGA2P4-201ENST00000441462 777 ntBASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AC099548.2-209ENST00000480264 625 ntBASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 AL162727.3-201ENST00000635661 2787 ntBASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX2-3Q8TAU0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms