Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZBED1P1-201ENST00000502364 1930 ntBASIC16.72■□□□□ 0.27
LMO3Q8TAP4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LMO3Q8TAP4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LMO3Q8TAP4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LMO3Q8TAP4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LMO3Q8TAP4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 BASP1P1-201ENST00000430708 665 ntBASIC16.71■□□□□ 0.27
LMO3Q8TAP4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 AC104794.3-201ENST00000566840 1248 ntBASIC16.71■□□□□ 0.27
LMO3Q8TAP4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.71■□□□□ 0.27
LMO3Q8TAP4 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.71■□□□□ 0.27
LMO3Q8TAP4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.71■□□□□ 0.27
LMO3Q8TAP4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.71■□□□□ 0.27
LMO3Q8TAP4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMO3Q8TAP4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.71■□□□□ 0.26
LMO3Q8TAP4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
LMO3Q8TAP4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 CICP24-201ENST00000605464 2705 ntBASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
LMO3Q8TAP4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AC023310.3-201ENST00000557027 670 ntBASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AC100756.1-201ENST00000562736 682 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms