Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 CYP4F24P-201ENST00000586049 1580 ntBASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AC087499.6-201ENST00000411576 835 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AP006294.1-201ENST00000415407 339 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 ARSEP1-201ENST00000420443 635 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AC132938.2-201ENST00000579188 680 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 IGHV3-72-202ENST00000621503 303 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AL033527.5-202ENST00000641632 1098 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 AL591163.1-201ENST00000641757 987 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC33Q8N5R6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 AP001282.1-201ENST00000531301 1499 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 AC009090.5-201ENST00000624886 2285 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 GIMAP3P-201ENST00000495150 836 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 IGHV3-71-201ENST00000523324 359 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 HILS1-202ENST00000545329 423 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 AC026979.3-201ENST00000607315 403 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 AC007431.3-201ENST00000623221 587 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 KRT8P12-202ENST00000472924 1397 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 FLJ16779-201ENST00000612722 7638 ntBASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms