Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AC007969.1-201ENST00000433675 447 ntBASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AC104306.2-201ENST00000451877 341 ntBASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 RNA5SP486-201ENST00000515961 83 ntBASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AC018695.7-201ENST00000624587 2492 ntBASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS3Q8IXF0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 MIR1202-201ENST00000408529 83 ntBASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 AP001258.2-201ENST00000529891 490 ntBASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 NIFKP4-201ENST00000567275 1192 ntBASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 DOC2GP-204ENST00000639052 2548 ntBASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NPAS3Q8IXF0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 BTBD6P1-201ENST00000412176 1267 ntBASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS3Q8IXF0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms