Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 MIR663B-201ENST00000408361 115 ntBASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 AC004945.1-201ENST00000416738 983 ntBASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 RHOQP1-201ENST00000555758 579 ntBASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 AC020914.3-201ENST00000594712 304 ntBASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 KRT8P14-201ENST00000414254 1442 ntBASIC16.62■□□□□ 0.25
NPAS4Q8IUM7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 PCDHA14-201ENST00000506751 2298 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 AC007787.1-201ENST00000588095 1583 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 AC079178.1-201ENST00000420915 656 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 POM121L10P-201ENST00000436994 1285 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 HSPB1P2-201ENST00000448722 546 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 BX284668.4-201ENST00000453917 508 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 AL662844.4-201ENST00000606367 2838 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 LINC02447-202ENST00000501888 2146 ntBASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS4Q8IUM7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 AL023775.1-201ENST00000454907 1746 ntBASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms