Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 AC092474.2-201ENST00000424288 719 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 AL671277.1-201ENST00000429656 993 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 DNAJB3-202ENST00000449667 1266 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 AC109635.5-201ENST00000533593 962 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 MIR3909-201ENST00000579518 119 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 AL009183.1-201ENST00000603760 355 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 AC126365.1-201ENST00000578585 1514 ntBASIC14.03□□□□□ -0.16
LRRC28Q86X40 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC28Q86X40 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC28Q86X40 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
LRRC28Q86X40 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC28Q86X40 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 RNU1-129P-201ENST00000384064 167 ntBASIC14.02□□□□□ -0.17
LRRC28Q86X40 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 SNHG9-202ENST00000564014 471 ntBASIC14.02□□□□□ -0.17
LRRC28Q86X40 U1.21-201ENST00000580816 167 ntBASIC14.02□□□□□ -0.17
LRRC28Q86X40 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 AC092127.1-201ENST00000567093 3455 ntBASIC14.02□□□□□ -0.17
LRRC28Q86X40 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms