Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 AC236430.1-201ENST00000402231 743 ntBASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 AC015922.1-201ENST00000421102 1152 ntBASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 AC002472.2-201ENST00000442739 958 ntBASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 SERPINA7P1-201ENST00000443077 631 ntBASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 AC138761.1-201ENST00000584393 385 ntBASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
LYSMD3Q7Z3D4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 AC127383.1-201ENST00000444697 1800 ntBASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD3Q7Z3D4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 TERF1P3-201ENST00000505638 1227 ntBASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 SERBP1P5-201ENST00000510079 1181 ntBASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 AC092337.1-201ENST00000568699 1129 ntBASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 LINC02560-201ENST00000596379 459 ntBASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 AC008761.3-201ENST00000624803 892 ntBASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 TNRC18P2-201ENST00000417666 2714 ntBASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD3Q7Z3D4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms