Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC149Q6ZUS6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 AC092506.1-202ENST00000401022 528 ntBASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 AL022328.3-201ENST00000607943 679 ntBASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC149Q6ZUS6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.39■□□□□ 0.22
CCDC149Q6ZUS6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CCDC149Q6ZUS6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.39■□□□□ 0.22
CCDC149Q6ZUS6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 MIR326-201ENST00000362220 95 ntBASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 ZNF767P-206ENST00000513792 565 ntBASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AP001258.2-201ENST00000529891 490 ntBASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 MIR4313-201ENST00000580760 101 ntBASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 GNRHR2-203ENST00000581100 1187 ntBASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC149Q6ZUS6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 AL596087.1-201ENST00000400979 1969 ntBASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC149Q6ZUS6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms