Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 AL513210.1-201ENST00000629608 234 ntBASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 FAM86GP-201ENST00000448322 971 ntBASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 AC109322.1-201ENST00000524499 1264 ntBASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 REXO1L3P-201ENST00000622202 1288 ntBASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 LINC00628-201ENST00000628516 1289 ntBASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 AC090616.6-203ENST00000579186 1945 ntBASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 C18orf15-201ENST00000623680 2534 ntBASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 AL590787.1-201ENST00000568856 1315 ntBASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXR1Q6PIV2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 REXO1L2P-201ENST00000425429 2069 ntBASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 AC023141.5-201ENST00000458585 616 ntBASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 AC112191.1-201ENST00000523689 701 ntBASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 AC022145.2-201ENST00000598203 171 ntBASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 PTENP1-202ENST00000532280 3996 ntBASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms