Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AL596276.2-201ENST00000447525 331 ntBASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AC104073.2-201ENST00000453737 312 ntBASIC19.39■□□□□ 0.69
RC3H1Q5TC82 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 MIR4783-201ENST00000580343 82 ntBASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AC004466.1-201ENST00000599515 1080 ntBASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AL805961.1-203ENST00000641078 1258 ntBASIC19.39■□□□□ 0.69
RC3H1Q5TC82 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AP000593.2-201ENST00000542775 1433 ntBASIC19.39■□□□□ 0.69
RC3H1Q5TC82 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AC022211.2-201ENST00000585075 2527 ntBASIC19.39■□□□□ 0.69
RC3H1Q5TC82 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 AC004899.1-201ENST00000424687 1714 ntBASIC19.38■□□□□ 0.69
RC3H1Q5TC82 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 FZD10-202ENST00000539839 3282 ntBASIC19.38■□□□□ 0.69
RC3H1Q5TC82 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 MIR7845-201ENST00000618396 99 ntBASIC19.38■□□□□ 0.69
RC3H1Q5TC82 AL162426.1-201ENST00000624141 743 ntBASIC19.38■□□□□ 0.69
RC3H1Q5TC82 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RC3H1Q5TC82 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 RPL17P11-201ENST00000417593 544 ntBASIC19.37■□□□□ 0.69
RC3H1Q5TC82 HLA-K-203ENST00000430151 1046 ntBASIC19.37■□□□□ 0.69
RC3H1Q5TC82 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms