Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 RPS8P6-201ENST00000426177 609 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 FAM8A3P-201ENST00000427218 844 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 PHKG1P2-201ENST00000457537 863 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AC073389.1-201ENST00000595595 795 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AL121912.1-201ENST00000603683 238 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 CICP14-201ENST00000629111 2732 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 WASH3P-207ENST00000560956 1394 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 FO538757.1-201ENST00000623083 1397 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AC098831.1-202ENST00000438821 336 ntBASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AC009947.1-201ENST00000444350 727 ntBASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms