Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 AC004945.1-201ENST00000416738 983 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 BNIP3P42-201ENST00000454982 569 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 AP001582.1-201ENST00000525856 295 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 MIR4538-201ENST00000581377 78 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 BNIP3P29-201ENST00000598302 571 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 AC011447.5-201ENST00000616168 564 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 AL109620.1-201ENST00000618738 1197 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 ACKR1-201ENST00000368121 1240 ntBASIC16.55■□□□□ 0.24
VARS2Q5ST30 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 FTH1P14-201ENST00000482930 551 ntBASIC16.55■□□□□ 0.24
VARS2Q5ST30 AC106760.1-201ENST00000508690 800 ntBASIC16.55■□□□□ 0.24
VARS2Q5ST30 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 MIR6787-201ENST00000616675 61 ntBASIC16.55■□□□□ 0.24
VARS2Q5ST30 AC092723.2-201ENST00000624955 793 ntBASIC16.55■□□□□ 0.24
VARS2Q5ST30 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VARS2Q5ST30 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.55■□□□□ 0.24
VARS2Q5ST30 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 BCYRN1-201ENST00000418539 200 ntBASIC16.54■□□□□ 0.24
VARS2Q5ST30 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 AC007551.1-201ENST00000457394 519 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms