Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DDR1Q08345 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.16■□□□□ 0.66
DDR1Q08345 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 AC021723.1-201ENST00000486306 515 ntBASIC19.16■□□□□ 0.66
DDR1Q08345 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.16■□□□□ 0.66
DDR1Q08345 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.16■□□□□ 0.66
DDR1Q08345 AL023803.2-201ENST00000620080 638 ntBASIC19.16■□□□□ 0.66
DDR1Q08345 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.16■□□□□ 0.66
DDR1Q08345 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DDR1Q08345 HTR7P1-202ENST00000624664 4411 ntBASIC19.16■□□□□ 0.66
DDR1Q08345 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DDR1Q08345 PCDHA12-202ENST00000613593 2588 ntBASIC19.16■□□□□ 0.66
DDR1Q08345 AC084018.2-201ENST00000613093 2607 ntBASIC19.16■□□□□ 0.66
DDR1Q08345 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.16■□□□□ 0.66
DDR1Q08345 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDR1Q08345 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DDR1Q08345 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DDR1Q08345 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 AL136309.1-201ENST00000403917 691 ntBASIC19.15■□□□□ 0.66
DDR1Q08345 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.15■□□□□ 0.66
DDR1Q08345 AC234782.1-201ENST00000451950 919 ntBASIC19.15■□□□□ 0.66
DDR1Q08345 AC104784.1-201ENST00000473096 294 ntBASIC19.15■□□□□ 0.66
DDR1Q08345 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 AC004066.1-201ENST00000502488 802 ntBASIC19.15■□□□□ 0.66
DDR1Q08345 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.15■□□□□ 0.66
DDR1Q08345 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.15■□□□□ 0.66
DDR1Q08345 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.15■□□□□ 0.66
DDR1Q08345 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.15■□□□□ 0.66
DDR1Q08345 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.15■□□□□ 0.66
DDR1Q08345 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDR1Q08345 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.15■□□□□ 0.66
DDR1Q08345 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DDR1Q08345 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DDR1Q08345 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DDR1Q08345 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.14■□□□□ 0.65
DDR1Q08345 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.14■□□□□ 0.65
DDR1Q08345 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DDR1Q08345 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDR1Q08345 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
DDR1Q08345 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
DDR1Q08345 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.14■□□□□ 0.65
DDR1Q08345 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.14■□□□□ 0.65
DDR1Q08345 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.14■□□□□ 0.65
DDR1Q08345 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.14■□□□□ 0.65
DDR1Q08345 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
DDR1Q08345 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.14■□□□□ 0.65
DDR1Q08345 AC103988.2-201ENST00000561804 725 ntBASIC19.14■□□□□ 0.65
DDR1Q08345 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.14■□□□□ 0.65
DDR1Q08345 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.14■□□□□ 0.65
DDR1Q08345 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDR1Q08345 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.14■□□□□ 0.65
DDR1Q08345 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDR1Q08345 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDR1Q08345 AL805961.1-203ENST00000641078 1258 ntBASIC19.14■□□□□ 0.65
DDR1Q08345 AC004923.1-202ENST00000642106 209 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms