Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRA2BP62995 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TRA2BP62995 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRA2BP62995 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRA2BP62995 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.78□□□□□ -0.04
TRA2BP62995 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRA2BP62995 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.77□□□□□ -0.04
TRA2BP62995 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 AL121723.1-201ENST00000445194 1519 ntBASIC14.77□□□□□ -0.04
TRA2BP62995 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRA2BP62995 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRA2BP62995 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRA2BP62995 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.77□□□□□ -0.05
TRA2BP62995 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.77□□□□□ -0.05
TRA2BP62995 DUX4L27-201ENST00000554796 1261 ntBASIC14.77□□□□□ -0.05
TRA2BP62995 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.77□□□□□ -0.05
TRA2BP62995 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRA2BP62995 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRA2BP62995 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.77□□□□□ -0.05
TRA2BP62995 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.77□□□□□ -0.05
TRA2BP62995 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRA2BP62995 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.77□□□□□ -0.05
TRA2BP62995 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
TRA2BP62995 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.77□□□□□ -0.05
TRA2BP62995 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRA2BP62995 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 AC067930.6-201ENST00000623257 4947 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.76□□□□□ -0.05
TRA2BP62995 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 WASH3P-207ENST00000560956 1394 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRA2BP62995 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.76□□□□□ -0.05
TRA2BP62995 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.76□□□□□ -0.05
TRA2BP62995 GHSR-202ENST00000427970 912 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.76□□□□□ -0.05
TRA2BP62995 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.76□□□□□ -0.05
TRA2BP62995 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.76□□□□□ -0.05
TRA2BP62995 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.76□□□□□ -0.05
TRA2BP62995 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.76□□□□□ -0.05
TRA2BP62995 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.76□□□□□ -0.05
TRA2BP62995 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.76□□□□□ -0.05
TRA2BP62995 AC000095.1-201ENST00000603208 874 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.76□□□□□ -0.05
TRA2BP62995 GPALPP1-207ENST00000611650 899 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 AC004461.2-201ENST00000629517 803 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 AC023024.2-201ENST00000623561 1993 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 MROH4P-201ENST00000431302 1578 ntBASIC14.76□□□□□ -0.05
TRA2BP62995 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.76□□□□□ -0.05
TRA2BP62995 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRA2BP62995 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRA2BP62995 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRA2BP62995 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.75□□□□□ -0.05
TRA2BP62995 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRA2BP62995 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRA2BP62995 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms