Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.73■□□□□ 0.11
AP1S1P61966 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.73■□□□□ 0.11
AP1S1P61966 AC092552.1-201ENST00000547243 906 ntBASIC15.73■□□□□ 0.11
AP1S1P61966 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.73■□□□□ 0.11
AP1S1P61966 AC025181.2-201ENST00000606994 802 ntBASIC15.73■□□□□ 0.11
AP1S1P61966 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.73■□□□□ 0.11
AP1S1P61966 MIR8072-201ENST00000614241 80 ntBASIC15.73■□□□□ 0.11
AP1S1P61966 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.73■□□□□ 0.11
AP1S1P61966 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.73■□□□□ 0.11
AP1S1P61966 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
AP1S1P61966 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.73■□□□□ 0.11
AP1S1P61966 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP1S1P61966 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S1P61966 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
AP1S1P61966 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.72■□□□□ 0.11
AP1S1P61966 PAUPAR-201ENST00000630360 2965 ntBASIC15.72■□□□□ 0.11
AP1S1P61966 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 AL035633.1-201ENST00000406139 838 ntBASIC15.72■□□□□ 0.11
AP1S1P61966 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.72■□□□□ 0.11
AP1S1P61966 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.72■□□□□ 0.11
AP1S1P61966 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.72■□□□□ 0.11
AP1S1P61966 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
AP1S1P61966 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.72■□□□□ 0.11
AP1S1P61966 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.72■□□□□ 0.11
AP1S1P61966 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.72■□□□□ 0.11
AP1S1P61966 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S1P61966 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S1P61966 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S1P61966 TMBIM7P-203ENST00000641617 1718 ntBASIC15.71■□□□□ 0.11
AP1S1P61966 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.71■□□□□ 0.11
AP1S1P61966 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP1S1P61966 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.71■□□□□ 0.11
AP1S1P61966 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP1S1P61966 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 ELK1P1-201ENST00000485699 580 ntBASIC15.71■□□□□ 0.11
AP1S1P61966 WASH4P-201ENST00000564273 1246 ntBASIC15.71■□□□□ 0.11
AP1S1P61966 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.71■□□□□ 0.11
AP1S1P61966 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.71■□□□□ 0.11
AP1S1P61966 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP1S1P61966 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.71■□□□□ 0.11
AP1S1P61966 LINC02084-201ENST00000606069 1096 ntBASIC15.71■□□□□ 0.11
AP1S1P61966 AC025048.6-201ENST00000634326 1161 ntBASIC15.71■□□□□ 0.11
AP1S1P61966 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.71■□□□□ 0.11
AP1S1P61966 AL358472.5-202ENST00000641448 1267 ntBASIC15.71■□□□□ 0.11
AP1S1P61966 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP1S1P61966 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.71■□□□□ 0.11
AP1S1P61966 AC105917.1-201ENST00000506637 2539 ntBASIC15.71■□□□□ 0.11
AP1S1P61966 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S1P61966 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP1S1P61966 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S1P61966 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S1P61966 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP1S1P61966 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.71■□□□□ 0.11
AP1S1P61966 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP1S1P61966 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
AP1S1P61966 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.71■□□□□ 0.1
AP1S1P61966 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP1S1P61966 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms