Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK4P57078 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.43■□□□□ 0.86
RIPK4P57078 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK4P57078 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 RN7SL837P-201ENST00000463010 287 ntBASIC20.43■□□□□ 0.86
RIPK4P57078 GAPDHP40-201ENST00000505218 1006 ntBASIC20.43■□□□□ 0.86
RIPK4P57078 AC026410.3-201ENST00000514280 936 ntBASIC20.43■□□□□ 0.86
RIPK4P57078 CR383656.12-201ENST00000549567 513 ntBASIC20.43■□□□□ 0.86
RIPK4P57078 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.43■□□□□ 0.86
RIPK4P57078 AC124283.3-201ENST00000570869 594 ntBASIC20.43■□□□□ 0.86
RIPK4P57078 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.43■□□□□ 0.86
RIPK4P57078 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.43■□□□□ 0.86
RIPK4P57078 AC133539.2-201ENST00000604757 467 ntBASIC20.43■□□□□ 0.86
RIPK4P57078 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 IGHV3-72-202ENST00000621503 303 ntBASIC20.43■□□□□ 0.86
RIPK4P57078 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK4P57078 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK4P57078 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
RIPK4P57078 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK4P57078 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
RIPK4P57078 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RIPK4P57078 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK4P57078 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
RIPK4P57078 RPL13AP25-201ENST00000484130 612 ntBASIC20.42■□□□□ 0.86
RIPK4P57078 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RIPK4P57078 AC120045.2-201ENST00000567334 178 ntBASIC20.42■□□□□ 0.86
RIPK4P57078 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.42■□□□□ 0.86
RIPK4P57078 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK4P57078 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK4P57078 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RIPK4P57078 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK4P57078 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RIPK4P57078 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.41■□□□□ 0.86
RIPK4P57078 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK4P57078 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK4P57078 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK4P57078 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.41■□□□□ 0.86
RIPK4P57078 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.41■□□□□ 0.86
RIPK4P57078 RPSAP52-203ENST00000622976 1023 ntBASIC20.41■□□□□ 0.86
RIPK4P57078 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.41■□□□□ 0.86
RIPK4P57078 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RIPK4P57078 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RIPK4P57078 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK4P57078 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RIPK4P57078 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK4P57078 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms