Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH6P55285 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH6P55285 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH6P55285 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH6P55285 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH6P55285 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH6P55285 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH6P55285 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH6P55285 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH6P55285 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH6P55285 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH6P55285 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH6P55285 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH6P55285 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH6P55285 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH6P55285 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH6P55285 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH6P55285 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH6P55285 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 AC051619.7-201ENST00000568314 623 ntBASIC16.33■□□□□ 0.2
CDH6P55285 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH6P55285 TEX28P1-201ENST00000613479 1221 ntBASIC16.33■□□□□ 0.2
CDH6P55285 TEX28P2-201ENST00000617764 1221 ntBASIC16.33■□□□□ 0.2
CDH6P55285 AC073592.8-201ENST00000624126 511 ntBASIC16.33■□□□□ 0.2
CDH6P55285 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH6P55285 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH6P55285 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH6P55285 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH6P55285 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH6P55285 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH6P55285 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH6P55285 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH6P55285 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH6P55285 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CDH6P55285 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CDH6P55285 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 AC074338.1-201ENST00000416825 156 ntBASIC16.32■□□□□ 0.2
CDH6P55285 AC107890.1-201ENST00000422478 521 ntBASIC16.32■□□□□ 0.2
CDH6P55285 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 AC069120.2-201ENST00000524091 540 ntBASIC16.32■□□□□ 0.2
CDH6P55285 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH6P55285 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 AC103702.1-201ENST00000548801 2630 ntBASIC16.32■□□□□ 0.2
CDH6P55285 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 AL512361.1-201ENST00000554200 418 ntBASIC16.32■□□□□ 0.2
CDH6P55285 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH6P55285 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH6P55285 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms