Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
CLCN2P51788 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CLCN2P51788 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN2P51788 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLCN2P51788 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN2P51788 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 FAM86GP-201ENST00000448322 971 ntBASIC15.27■□□□□ 0.04
CLCN2P51788 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN2P51788 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.27■□□□□ 0.04
CLCN2P51788 AC067863.1-201ENST00000494933 530 ntBASIC15.27■□□□□ 0.04
CLCN2P51788 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN2P51788 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 ALG1L8P-201ENST00000533887 760 ntBASIC15.27■□□□□ 0.04
CLCN2P51788 AC026150.2-201ENST00000564693 1156 ntBASIC15.27■□□□□ 0.04
CLCN2P51788 AC027796.2-201ENST00000575326 344 ntBASIC15.27■□□□□ 0.04
CLCN2P51788 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN2P51788 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN2P51788 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN2P51788 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN2P51788 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN2P51788 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN2P51788 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN2P51788 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN2P51788 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN2P51788 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN2P51788 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN2P51788 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN2P51788 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN2P51788 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN2P51788 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CLCN2P51788 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLCN2P51788 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLCN2P51788 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLCN2P51788 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN2P51788 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 CNN2P2-201ENST00000443536 909 ntBASIC15.26■□□□□ 0.03
CLCN2P51788 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN2P51788 CNN2P3-201ENST00000450201 906 ntBASIC15.26■□□□□ 0.03
CLCN2P51788 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCN2P51788 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCN2P51788 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 RFPL4AP1-201ENST00000530883 850 ntBASIC15.26■□□□□ 0.03
CLCN2P51788 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 SPTSSB-204ENST00000617024 1292 ntBASIC15.26■□□□□ 0.03
CLCN2P51788 AL136317.3-201ENST00000618497 906 ntBASIC15.26■□□□□ 0.03
CLCN2P51788 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN2P51788 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN2P51788 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN2P51788 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN2P51788 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN2P51788 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN2P51788 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN2P51788 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN2P51788 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN2P51788 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms