Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.55■□□□□ 0.24
TUBP50607 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.55■□□□□ 0.24
TUBP50607 CHCHD2P3-201ENST00000603038 451 ntBASIC16.55■□□□□ 0.24
TUBP50607 AC093726.1-201ENST00000608064 963 ntBASIC16.55■□□□□ 0.24
TUBP50607 AL391069.4-201ENST00000609583 481 ntBASIC16.55■□□□□ 0.24
TUBP50607 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.55■□□□□ 0.24
TUBP50607 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.55■□□□□ 0.24
TUBP50607 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
TUBP50607 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TUBP50607 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBP50607 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 AC112504.1-201ENST00000623415 1841 ntBASIC16.54■□□□□ 0.24
TUBP50607 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBP50607 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TUBP50607 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBP50607 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TUBP50607 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBP50607 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBP50607 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
TUBP50607 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBP50607 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 AC007431.3-201ENST00000623221 587 ntBASIC16.54■□□□□ 0.24
TUBP50607 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBP50607 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TUBP50607 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBP50607 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 CICP4-201ENST00000447359 2812 ntBASIC16.53■□□□□ 0.24
TUBP50607 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TUBP50607 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.53■□□□□ 0.24
TUBP50607 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TUBP50607 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
TUBP50607 TOMM22P5-201ENST00000416399 439 ntBASIC16.53■□□□□ 0.24
TUBP50607 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TUBP50607 SLED1-202ENST00000512051 380 ntBASIC16.53■□□□□ 0.24
TUBP50607 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.53■□□□□ 0.24
TUBP50607 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TUBP50607 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.53■□□□□ 0.24
TUBP50607 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.53■□□□□ 0.24
TUBP50607 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.53■□□□□ 0.24
TUBP50607 AC008494.3-201ENST00000606615 944 ntBASIC16.53■□□□□ 0.24
TUBP50607 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.53■□□□□ 0.24
TUBP50607 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms