Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 DBET-201ENST00000630918 3363 ntBASIC15.92■□□□□ 0.14
HADHAP40939 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 AC138035.3-201ENST00000622706 2791 ntBASIC15.91■□□□□ 0.14
HADHAP40939 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.91■□□□□ 0.14
HADHAP40939 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
HADHAP40939 HMGN1P19-201ENST00000436976 333 ntBASIC15.91■□□□□ 0.14
HADHAP40939 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 HLA-V-204ENST00000476601 1289 ntBASIC15.91■□□□□ 0.14
HADHAP40939 AC069120.2-201ENST00000524091 540 ntBASIC15.91■□□□□ 0.14
HADHAP40939 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.91■□□□□ 0.14
HADHAP40939 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.91■□□□□ 0.14
HADHAP40939 AC140878.1-201ENST00000565277 250 ntBASIC15.91■□□□□ 0.14
HADHAP40939 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.91■□□□□ 0.14
HADHAP40939 AC018892.3-201ENST00000623986 2499 ntBASIC15.91■□□□□ 0.14
HADHAP40939 AL136379.1-201ENST00000623471 2642 ntBASIC15.91■□□□□ 0.14
HADHAP40939 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HADHAP40939 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HADHAP40939 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HADHAP40939 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
HADHAP40939 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HADHAP40939 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HADHAP40939 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HADHAP40939 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HADHAP40939 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HADHAP40939 AC107890.1-201ENST00000422478 521 ntBASIC15.9■□□□□ 0.14
HADHAP40939 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 RFPL4AP1-201ENST00000530883 850 ntBASIC15.9■□□□□ 0.14
HADHAP40939 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.9■□□□□ 0.14
HADHAP40939 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 AC051619.7-201ENST00000568314 623 ntBASIC15.9■□□□□ 0.14
HADHAP40939 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 MIR6069-201ENST00000620069 79 ntBASIC15.9■□□□□ 0.14
HADHAP40939 AC093028.1-201ENST00000622998 982 ntBASIC15.9■□□□□ 0.14
HADHAP40939 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.9■□□□□ 0.14
HADHAP40939 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms