Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.61■□□□□ 0.73
COL15A1P39059 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.61■□□□□ 0.73
COL15A1P39059 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.61■□□□□ 0.73
COL15A1P39059 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.61■□□□□ 0.73
COL15A1P39059 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.61■□□□□ 0.73
COL15A1P39059 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL15A1P39059 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
COL15A1P39059 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COL15A1P39059 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 AC018695.7-201ENST00000624587 2492 ntBASIC19.6■□□□□ 0.73
COL15A1P39059 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
COL15A1P39059 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.6■□□□□ 0.73
COL15A1P39059 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 ELK2AP-201ENST00000392510 1007 ntBASIC19.6■□□□□ 0.73
COL15A1P39059 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
COL15A1P39059 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 AC005077.2-201ENST00000449786 690 ntBASIC19.6■□□□□ 0.73
COL15A1P39059 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.6■□□□□ 0.73
COL15A1P39059 AC105129.2-201ENST00000559536 390 ntBASIC19.6■□□□□ 0.73
COL15A1P39059 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.6■□□□□ 0.73
COL15A1P39059 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL15A1P39059 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
COL15A1P39059 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL15A1P39059 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.6■□□□□ 0.73
COL15A1P39059 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.6■□□□□ 0.73
COL15A1P39059 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
COL15A1P39059 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.59■□□□□ 0.73
COL15A1P39059 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 AC114812.1-204ENST00000449669 728 ntBASIC19.59■□□□□ 0.73
COL15A1P39059 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.59■□□□□ 0.73
COL15A1P39059 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.59■□□□□ 0.73
COL15A1P39059 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.59■□□□□ 0.73
COL15A1P39059 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.59■□□□□ 0.73
COL15A1P39059 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 AC022188.1-201ENST00000620960 1664 ntBASIC19.59■□□□□ 0.73
COL15A1P39059 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COL15A1P39059 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms