Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 KRT18P67-201ENST00000432816 1264 ntBASIC12.99□□□□□ -0.33
SNCAP37840 PRSS29P-201ENST00000440800 595 ntBASIC12.99□□□□□ -0.33
SNCAP37840 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.99□□□□□ -0.33
SNCAP37840 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.99□□□□□ -0.33
SNCAP37840 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.99□□□□□ -0.33
SNCAP37840 TP73-AS1-207ENST00000624167 988 ntBASIC12.99□□□□□ -0.33
SNCAP37840 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SNCAP37840 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 AC112693.3-201ENST00000624819 1983 ntBASIC12.98□□□□□ -0.33
SNCAP37840 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.98□□□□□ -0.33
SNCAP37840 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.98□□□□□ -0.33
SNCAP37840 HMGA1P7-201ENST00000406908 502 ntBASIC12.98□□□□□ -0.33
SNCAP37840 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.98□□□□□ -0.33
SNCAP37840 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 AL121912.1-201ENST00000603683 238 ntBASIC12.98□□□□□ -0.33
SNCAP37840 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.98□□□□□ -0.33
SNCAP37840 ACTL9-202ENST00000612068 1252 ntBASIC12.98□□□□□ -0.33
SNCAP37840 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SNCAP37840 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCAP37840 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCAP37840 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms