Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPB2P35606 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 CNN2P8-201ENST00000421872 913 ntBASIC17.86■□□□□ 0.45
COPB2P35606 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 PFN1P12-201ENST00000455938 534 ntBASIC17.86■□□□□ 0.45
COPB2P35606 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.86■□□□□ 0.45
COPB2P35606 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 AC023310.1-201ENST00000554836 735 ntBASIC17.86■□□□□ 0.45
COPB2P35606 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.86■□□□□ 0.45
COPB2P35606 AC025279.2-201ENST00000569730 653 ntBASIC17.86■□□□□ 0.45
COPB2P35606 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 MIR4538-201ENST00000581377 78 ntBASIC17.86■□□□□ 0.45
COPB2P35606 AC010328.2-201ENST00000597698 1111 ntBASIC17.86■□□□□ 0.45
COPB2P35606 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPB2P35606 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPB2P35606 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPB2P35606 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COPB2P35606 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPB2P35606 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPB2P35606 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPB2P35606 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.86■□□□□ 0.45
COPB2P35606 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.85■□□□□ 0.45
COPB2P35606 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.85■□□□□ 0.45
COPB2P35606 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.85■□□□□ 0.45
COPB2P35606 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.85■□□□□ 0.45
COPB2P35606 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.85■□□□□ 0.45
COPB2P35606 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.85■□□□□ 0.45
COPB2P35606 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.85■□□□□ 0.45
COPB2P35606 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.85■□□□□ 0.45
COPB2P35606 AC244669.2-201ENST00000612320 853 ntBASIC17.85■□□□□ 0.45
COPB2P35606 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPB2P35606 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.85■□□□□ 0.45
COPB2P35606 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.85■□□□□ 0.45
COPB2P35606 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.85■□□□□ 0.45
COPB2P35606 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.84■□□□□ 0.45
COPB2P35606 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 AL133338.1-201ENST00000565695 1517 ntBASIC17.84■□□□□ 0.45
COPB2P35606 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 AL162727.3-201ENST00000635661 2787 ntBASIC17.84■□□□□ 0.45
COPB2P35606 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COPB2P35606 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COPB2P35606 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.84■□□□□ 0.45
COPB2P35606 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.84■□□□□ 0.45
COPB2P35606 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.84■□□□□ 0.45
COPB2P35606 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms