Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC1P35251 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC1P35251 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFC1P35251 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.56■□□□□ 0.24
RFC1P35251 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 AC092580.3-201ENST00000430932 139 ntBASIC16.56■□□□□ 0.24
RFC1P35251 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.56■□□□□ 0.24
RFC1P35251 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.56■□□□□ 0.24
RFC1P35251 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 AC027369.6-201ENST00000525520 931 ntBASIC16.56■□□□□ 0.24
RFC1P35251 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC1P35251 AL512361.1-201ENST00000554200 418 ntBASIC16.56■□□□□ 0.24
RFC1P35251 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFC1P35251 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC1P35251 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.55■□□□□ 0.24
RFC1P35251 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFC1P35251 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 AC112693.3-201ENST00000624819 1983 ntBASIC16.55■□□□□ 0.24
RFC1P35251 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC1P35251 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC1P35251 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC1P35251 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 FAM86GP-201ENST00000448322 971 ntBASIC16.55■□□□□ 0.24
RFC1P35251 SERBP1P3-201ENST00000459980 809 ntBASIC16.55■□□□□ 0.24
RFC1P35251 AC067863.1-201ENST00000494933 530 ntBASIC16.55■□□□□ 0.24
RFC1P35251 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC1P35251 AC097493.3-201ENST00000509725 367 ntBASIC16.55■□□□□ 0.24
RFC1P35251 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.55■□□□□ 0.24
RFC1P35251 AC025048.3-201ENST00000590609 569 ntBASIC16.55■□□□□ 0.24
RFC1P35251 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.55■□□□□ 0.24
RFC1P35251 AC005702.4-201ENST00000618393 416 ntBASIC16.55■□□□□ 0.24
RFC1P35251 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFC1P35251 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC1P35251 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RFC1P35251 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
RFC1P35251 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC1P35251 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RFC1P35251 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC1P35251 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC1P35251 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.54■□□□□ 0.24
RFC1P35251 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RFC1P35251 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms