Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.76■□□□□ 0.91
USP6P35125 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 AL662890.1-201ENST00000396818 632 ntBASIC20.76■□□□□ 0.91
USP6P35125 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.76■□□□□ 0.91
USP6P35125 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 FTLP10-202ENST00000505798 471 ntBASIC20.76■□□□□ 0.91
USP6P35125 AC022217.1-201ENST00000521069 738 ntBASIC20.76■□□□□ 0.91
USP6P35125 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.76■□□□□ 0.91
USP6P35125 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 AC091812.3-201ENST00000621362 345 ntBASIC20.76■□□□□ 0.91
USP6P35125 AC015967.2-201ENST00000624092 234 ntBASIC20.76■□□□□ 0.91
USP6P35125 AC006435.4-201ENST00000625037 234 ntBASIC20.76■□□□□ 0.91
USP6P35125 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 AL356737.1-201ENST00000634391 234 ntBASIC20.76■□□□□ 0.91
USP6P35125 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.76■□□□□ 0.91
USP6P35125 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.75■□□□□ 0.91
USP6P35125 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
USP6P35125 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.75■□□□□ 0.91
USP6P35125 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 SPTLC1P5-201ENST00000450718 252 ntBASIC20.75■□□□□ 0.91
USP6P35125 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.75■□□□□ 0.91
USP6P35125 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.75■□□□□ 0.91
USP6P35125 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
USP6P35125 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
USP6P35125 AL645939.5-201ENST00000606834 243 ntBASIC20.75■□□□□ 0.91
USP6P35125 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.75■□□□□ 0.91
USP6P35125 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
USP6P35125 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6P35125 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.75■□□□□ 0.91
USP6P35125 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 KRT8P19-201ENST00000551916 1455 ntBASIC20.74■□□□□ 0.91
USP6P35125 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.74■□□□□ 0.91
USP6P35125 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.74■□□□□ 0.91
USP6P35125 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.74■□□□□ 0.91
USP6P35125 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.74■□□□□ 0.91
USP6P35125 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.74■□□□□ 0.91
USP6P35125 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.74■□□□□ 0.91
USP6P35125 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6P35125 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
USP6P35125 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP6P35125 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 AP000593.2-201ENST00000542775 1433 ntBASIC20.73■□□□□ 0.91
USP6P35125 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.73■□□□□ 0.91
USP6P35125 MST1L-201ENST00000442552 2185 ntBASIC20.73■□□□□ 0.91
USP6P35125 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
USP6P35125 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms