Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC21.61■■□□□ 1.05
CPS1P31327 MIR4783-201ENST00000580343 82 ntBASIC21.61■■□□□ 1.05
CPS1P31327 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.61■■□□□ 1.05
CPS1P31327 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.61■■□□□ 1.05
CPS1P31327 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CPS1P31327 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC21.6■■□□□ 1.05
CPS1P31327 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC21.6■■□□□ 1.05
CPS1P31327 NAGK-204ENST00000443872 878 ntTSL 3 BASIC21.6■■□□□ 1.05
CPS1P31327 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
CPS1P31327 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CPS1P31327 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC21.6■■□□□ 1.05
CPS1P31327 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC21.6■■□□□ 1.05
CPS1P31327 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.6■■□□□ 1.05
CPS1P31327 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 MIR6858-201ENST00000620733 67 ntBASIC21.6■■□□□ 1.05
CPS1P31327 AL162426.1-201ENST00000624141 743 ntBASIC21.6■■□□□ 1.05
CPS1P31327 AL645728.2-202ENST00000641679 227 ntBASIC21.6■■□□□ 1.05
CPS1P31327 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CPS1P31327 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CPS1P31327 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.6■■□□□ 1.05
CPS1P31327 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.6■■□□□ 1.05
CPS1P31327 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC21.6■■□□□ 1.05
CPS1P31327 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CPS1P31327 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 HNRNPA1P41-201ENST00000397777 928 ntBASIC21.6■■□□□ 1.05
CPS1P31327 PUDPP3-201ENST00000445368 636 ntBASIC21.6■■□□□ 1.05
CPS1P31327 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC21.6■■□□□ 1.05
CPS1P31327 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC21.6■■□□□ 1.05
CPS1P31327 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPS1P31327 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 AC020916.1-201ENST00000587762 1774 ntBASIC21.59■■□□□ 1.05
CPS1P31327 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 RPS15-201ENST00000233609 534 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC21.59■■□□□ 1.05
CPS1P31327 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 RN7SL67P-201ENST00000492147 296 ntBASIC21.59■■□□□ 1.05
CPS1P31327 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.59■■□□□ 1.05
CPS1P31327 RPS15-205ENST00000586686 562 ntTSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 RPS15-208ENST00000591804 711 ntTSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPS1P31327 AL132780.4-201ENST00000624870 1135 ntBASIC21.59■■□□□ 1.05
CPS1P31327 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.59■■□□□ 1.05
CPS1P31327 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC21.59■■□□□ 1.05
CPS1P31327 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CPS1P31327 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CPS1P31327 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CPS1P31327 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.58■■□□□ 1.05
CPS1P31327 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPS1P31327 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPS1P31327 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC21.58■■□□□ 1.05
CPS1P31327 AL627231.1-201ENST00000394467 1125 ntBASIC21.58■■□□□ 1.04
CPS1P31327 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC21.58■■□□□ 1.04
CPS1P31327 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC21.58■■□□□ 1.04
CPS1P31327 AC009779.1-201ENST00000551138 283 ntBASIC21.58■■□□□ 1.04
CPS1P31327 AL118516.1-201ENST00000564152 670 ntBASIC21.58■■□□□ 1.04
CPS1P31327 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.58■■□□□ 1.04
CPS1P31327 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC21.58■■□□□ 1.04
CPS1P31327 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC21.58■■□□□ 1.04
CPS1P31327 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CPS1P31327 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms