Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.34□□□□□ -0.27
VAMP1P23763 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 AC092329.2-201ENST00000598402 547 ntBASIC13.34□□□□□ -0.27
VAMP1P23763 AC099336.1-202ENST00000602961 463 ntBASIC13.34□□□□□ -0.27
VAMP1P23763 AL591684.3-201ENST00000605187 298 ntBASIC13.34□□□□□ -0.27
VAMP1P23763 AC021097.1-201ENST00000607902 574 ntBASIC13.34□□□□□ -0.27
VAMP1P23763 AC097493.4-201ENST00000641197 219 ntBASIC13.34□□□□□ -0.27
VAMP1P23763 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.34□□□□□ -0.27
VAMP1P23763 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 AC012569.1-201ENST00000591191 1524 ntBASIC13.34□□□□□ -0.27
VAMP1P23763 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
VAMP1P23763 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.33□□□□□ -0.27
VAMP1P23763 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VAMP1P23763 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.33□□□□□ -0.27
VAMP1P23763 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC13.33□□□□□ -0.27
VAMP1P23763 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
VAMP1P23763 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
VAMP1P23763 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.33□□□□□ -0.28
VAMP1P23763 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 AC134407.2-201ENST00000625089 1978 ntBASIC13.33□□□□□ -0.28
VAMP1P23763 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
VAMP1P23763 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
VAMP1P23763 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 AC104076.2-201ENST00000448912 469 ntBASIC13.33□□□□□ -0.28
VAMP1P23763 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.33□□□□□ -0.28
VAMP1P23763 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.33□□□□□ -0.28
VAMP1P23763 AL365330.1-201ENST00000607459 531 ntBASIC13.33□□□□□ -0.28
VAMP1P23763 AC012306.2-201ENST00000609350 630 ntBASIC13.33□□□□□ -0.28
VAMP1P23763 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.33□□□□□ -0.28
VAMP1P23763 AP001282.1-201ENST00000531301 1499 ntBASIC13.33□□□□□ -0.28
VAMP1P23763 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
VAMP1P23763 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VAMP1P23763 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 AL731571.1-201ENST00000617058 5428 ntBASIC13.32□□□□□ -0.28
VAMP1P23763 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms