Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.89■□□□□ 0.61
KCNA3P22001 AC132192.2-201ENST00000596206 1147 ntBASIC18.89■□□□□ 0.61
KCNA3P22001 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA3P22001 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
KCNA3P22001 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA3P22001 CLUHP2-201ENST00000426660 1303 ntBASIC18.89■□□□□ 0.61
KCNA3P22001 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA3P22001 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
KCNA3P22001 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
KCNA3P22001 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA3P22001 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA3P22001 AC106820.2-201ENST00000563775 3264 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA3P22001 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 AC073150.1-201ENST00000450406 1084 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 RN7SL8P-201ENST00000461771 266 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNA3P22001 CTBP2P4-201ENST00000513884 920 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA3P22001 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA3P22001 AP001065.2-201ENST00000617205 644 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 AC138466.3-201ENST00000619983 221 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
KCNA3P22001 AC009084.3-201ENST00000623356 437 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA3P22001 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.88■□□□□ 0.61
KCNA3P22001 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA3P22001 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
KCNA3P22001 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 RN7SKP214-201ENST00000364208 315 ntBASIC18.87■□□□□ 0.61
KCNA3P22001 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.87■□□□□ 0.61
KCNA3P22001 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
KCNA3P22001 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.87■□□□□ 0.61
KCNA3P22001 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.87■□□□□ 0.61
KCNA3P22001 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
KCNA3P22001 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.87■□□□□ 0.61
KCNA3P22001 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.87■□□□□ 0.61
KCNA3P22001 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.87■□□□□ 0.61
KCNA3P22001 AC009955.4-201ENST00000597192 544 ntBASIC18.87■□□□□ 0.61
KCNA3P22001 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.87■□□□□ 0.61
KCNA3P22001 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
KCNA3P22001 AC106886.4-201ENST00000623557 2502 ntBASIC18.87■□□□□ 0.61
KCNA3P22001 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.87■□□□□ 0.61
KCNA3P22001 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA3P22001 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KCNA3P22001 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.86■□□□□ 0.61
KCNA3P22001 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
KCNA3P22001 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KCNA3P22001 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.86■□□□□ 0.61
KCNA3P22001 MIR4683-201ENST00000579659 81 ntBASIC18.86■□□□□ 0.61
KCNA3P22001 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.86■□□□□ 0.61
KCNA3P22001 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
KCNA3P22001 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.86■□□□□ 0.61
KCNA3P22001 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.86■□□□□ 0.61
KCNA3P22001 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms