Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KRT4P19013 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
KRT4P19013 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 AC140479.7-201ENST00000636301 2332 ntBASIC15.79■□□□□ 0.12
KRT4P19013 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
KRT4P19013 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KRT4P19013 FOXO1B-201ENST00000504678 1527 ntBASIC15.78■□□□□ 0.12
KRT4P19013 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT4P19013 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 CICP4-201ENST00000447359 2812 ntBASIC15.78■□□□□ 0.12
KRT4P19013 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 CICP14-201ENST00000629111 2732 ntBASIC15.78■□□□□ 0.12
KRT4P19013 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 BCAR1-209ENST00000546196 1340 ntBASIC15.78■□□□□ 0.12
KRT4P19013 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 RPS8P6-201ENST00000426177 609 ntBASIC15.78■□□□□ 0.12
KRT4P19013 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.78■□□□□ 0.12
KRT4P19013 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.78■□□□□ 0.12
KRT4P19013 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
KRT4P19013 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.78■□□□□ 0.12
KRT4P19013 AC116407.3-201ENST00000623905 1129 ntBASIC15.78■□□□□ 0.12
KRT4P19013 AC004877.2-201ENST00000623941 599 ntBASIC15.78■□□□□ 0.12
KRT4P19013 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT4P19013 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT4P19013 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT4P19013 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT4P19013 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT4P19013 AC117489.1-201ENST00000625169 3217 ntBASIC15.77■□□□□ 0.12
KRT4P19013 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KRT4P19013 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.77■□□□□ 0.12
KRT4P19013 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.77■□□□□ 0.12
KRT4P19013 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
KRT4P19013 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KRT4P19013 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.77■□□□□ 0.12
KRT4P19013 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT4P19013 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.77■□□□□ 0.12
KRT4P19013 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.77■□□□□ 0.12
KRT4P19013 PHKG1P2-201ENST00000457537 863 ntBASIC15.77■□□□□ 0.12
KRT4P19013 RNA5SP415-201ENST00000517246 115 ntBASIC15.77■□□□□ 0.12
KRT4P19013 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT4P19013 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms