Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 LINC02447-202ENST00000501888 2146 ntBASIC16.19■□□□□ 0.18
GJA1P17302 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.19■□□□□ 0.18
GJA1P17302 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GJA1P17302 MTHFR-217ENST00000641820 1569 ntBASIC16.19■□□□□ 0.18
GJA1P17302 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.19■□□□□ 0.18
GJA1P17302 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.19■□□□□ 0.18
GJA1P17302 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.19■□□□□ 0.18
GJA1P17302 AC078819.1-201ENST00000547454 765 ntBASIC16.19■□□□□ 0.18
GJA1P17302 AC012085.1-201ENST00000548270 765 ntBASIC16.19■□□□□ 0.18
GJA1P17302 AC025279.2-201ENST00000569730 653 ntBASIC16.19■□□□□ 0.18
GJA1P17302 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.19■□□□□ 0.18
GJA1P17302 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.19■□□□□ 0.18
GJA1P17302 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GJA1P17302 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.18■□□□□ 0.18
GJA1P17302 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GJA1P17302 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GJA1P17302 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.18■□□□□ 0.18
GJA1P17302 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.18■□□□□ 0.18
GJA1P17302 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.18■□□□□ 0.18
GJA1P17302 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.18■□□□□ 0.18
GJA1P17302 AL590640.2-201ENST00000457038 527 ntBASIC16.18■□□□□ 0.18
GJA1P17302 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.18■□□□□ 0.18
GJA1P17302 AC099548.2-209ENST00000480264 625 ntBASIC16.18■□□□□ 0.18
GJA1P17302 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.18■□□□□ 0.18
GJA1P17302 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.18■□□□□ 0.18
GJA1P17302 RN7SL560P-201ENST00000577943 264 ntBASIC16.18■□□□□ 0.18
GJA1P17302 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.18■□□□□ 0.18
GJA1P17302 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.18■□□□□ 0.18
GJA1P17302 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.18■□□□□ 0.18
GJA1P17302 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
GJA1P17302 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
GJA1P17302 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
GJA1P17302 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GJA1P17302 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 AL139384.1-201ENST00000612143 3047 ntBASIC16.18■□□□□ 0.18
GJA1P17302 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GJA1P17302 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GJA1P17302 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GJA1P17302 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.17■□□□□ 0.18
GJA1P17302 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GJA1P17302 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GJA1P17302 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
GJA1P17302 AC006449.5-201ENST00000610658 2098 ntBASIC16.17■□□□□ 0.18
GJA1P17302 PKD1P5-201ENST00000532415 10291 ntBASIC16.17■□□□□ 0.18
GJA1P17302 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.17■□□□□ 0.18
GJA1P17302 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.17■□□□□ 0.18
GJA1P17302 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.17■□□□□ 0.18
GJA1P17302 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GJA1P17302 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GJA1P17302 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GJA1P17302 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GJA1P17302 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GJA1P17302 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.17■□□□□ 0.18
GJA1P17302 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms