Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 BCRP1-201ENST00000444246 691 ntBASIC13.69□□□□□ -0.22
CCL2P13500 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL2P13500 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL2P13500 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.69□□□□□ -0.22
CCL2P13500 AL589987.1-201ENST00000453380 819 ntBASIC13.69□□□□□ -0.22
CCL2P13500 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL2P13500 SPCS2P1-201ENST00000561636 679 ntBASIC13.69□□□□□ -0.22
CCL2P13500 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.69□□□□□ -0.22
CCL2P13500 AC074044.1-201ENST00000609673 707 ntBASIC13.69□□□□□ -0.22
CCL2P13500 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL2P13500 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL2P13500 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL2P13500 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CCL2P13500 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL2P13500 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL2P13500 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL2P13500 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCL2P13500 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCL2P13500 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL2P13500 TSPY16P-201ENST00000449843 468 ntBASIC13.68□□□□□ -0.22
CCL2P13500 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL2P13500 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL2P13500 AC104794.3-201ENST00000566840 1248 ntBASIC13.68□□□□□ -0.22
CCL2P13500 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.68□□□□□ -0.22
CCL2P13500 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL2P13500 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL2P13500 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL2P13500 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 AL162727.3-201ENST00000635661 2787 ntBASIC13.68□□□□□ -0.22
CCL2P13500 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL2P13500 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 AC105250.1-201ENST00000509378 2057 ntBASIC13.68□□□□□ -0.22
CCL2P13500 AC073347.1-201ENST00000421633 2643 ntBASIC13.68□□□□□ -0.22
CCL2P13500 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL2P13500 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL2P13500 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL2P13500 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL2P13500 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL2P13500 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL2P13500 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL2P13500 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL2P13500 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL2P13500 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL2P13500 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms